Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
P04436 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
P04436 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 RNA5SP396-201ENST00000364834 120 ntBASIC6.83□□□□□ -1.32
P04436 SSX6-201ENST00000376932 562 ntBASIC6.83□□□□□ -1.32
P04436 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
P04436 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
P04436 TAS2R2P-201ENST00000421146 910 ntBASIC6.83□□□□□ -1.32
P04436 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.83□□□□□ -1.32
P04436 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.83□□□□□ -1.32
P04436 NIP7P1-201ENST00000433227 512 ntBASIC6.83□□□□□ -1.32
P04436 SS18L2P1-201ENST00000445923 213 ntBASIC6.83□□□□□ -1.32
P04436 AC092570.2-201ENST00000452117 1143 ntBASIC6.83□□□□□ -1.32
P04436 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 PTMAP1-205ENST00000455552 325 ntBASIC6.83□□□□□ -1.32
P04436 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.83□□□□□ -1.32
P04436 AC018892.2-201ENST00000457656 693 ntBASIC6.83□□□□□ -1.32
P04436 RN7SL791P-201ENST00000467868 295 ntBASIC6.83□□□□□ -1.32
P04436 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.83□□□□□ -1.32
P04436 RNA5SP287-201ENST00000516358 103 ntBASIC6.83□□□□□ -1.32
P04436 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.83□□□□□ -1.32
P04436 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
P04436 AC068631.3-201ENST00000538831 225 ntBASIC6.83□□□□□ -1.32
P04436 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.83□□□□□ -1.32
P04436 AL132640.2-202ENST00000559732 614 ntBASIC6.83□□□□□ -1.32
P04436 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.83□□□□□ -1.32
P04436 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.83□□□□□ -1.32
P04436 AC233699.1-201ENST00000569955 1168 ntBASIC6.83□□□□□ -1.32
P04436 RN7SL835P-201ENST00000579920 262 ntBASIC6.83□□□□□ -1.32
P04436 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.83□□□□□ -1.32
P04436 AL035417.2-201ENST00000603887 796 ntBASIC6.83□□□□□ -1.32
P04436 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.83□□□□□ -1.32
P04436 FRG2MP-201ENST00000613317 856 ntBASIC6.83□□□□□ -1.32
P04436 AC073488.7-201ENST00000633785 778 ntBASIC6.83□□□□□ -1.32
P04436 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.83□□□□□ -1.32
P04436 AC233280.20-201ENST00000637412 416 ntBASIC6.83□□□□□ -1.32
P04436 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.83□□□□□ -1.32
P04436 AC138627.1-203ENST00000641872 1680 ntBASIC6.83□□□□□ -1.32
P04436 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
P04436 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
P04436 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
P04436 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
P04436 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
P04436 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.82□□□□□ -1.32
P04436 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
P04436 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
P04436 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
P04436 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 OR6M2P-202ENST00000641780 2063 ntBASIC6.82□□□□□ -1.32
P04436 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 AL139806.1-201ENST00000403057 1002 ntBASIC6.82□□□□□ -1.32
P04436 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
P04436 AL355862.1-201ENST00000412705 353 ntBASIC6.82□□□□□ -1.32
P04436 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.82□□□□□ -1.32
P04436 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 OR5P4P-201ENST00000424698 917 ntBASIC6.82□□□□□ -1.32
P04436 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 AC005040.1-201ENST00000437783 482 ntBASIC6.82□□□□□ -1.32
P04436 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.82□□□□□ -1.32
P04436 RN7SL688P-201ENST00000471754 275 ntBASIC6.82□□□□□ -1.32
P04436 AC015820.1-201ENST00000473882 321 ntBASIC6.82□□□□□ -1.32
P04436 RPL5P15-201ENST00000475870 897 ntBASIC6.82□□□□□ -1.32
P04436 AC016559.1-201ENST00000511420 199 ntBASIC6.82□□□□□ -1.32
P04436 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
P04436 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.82□□□□□ -1.32
P04436 UBE2CP4-201ENST00000561405 535 ntBASIC6.82□□□□□ -1.32
P04436 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.82□□□□□ -1.32
P04436 AC024614.1-201ENST00000577546 307 ntBASIC6.82□□□□□ -1.32
P04436 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.82□□□□□ -1.32
P04436 RN7SL657P-201ENST00000582431 293 ntBASIC6.82□□□□□ -1.32
P04436 EXOSC3P2-201ENST00000594464 497 ntBASIC6.82□□□□□ -1.32
P04436 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.82□□□□□ -1.32
P04436 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
P04436 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms