Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALDH1A1P00352 GHR-212ENST00000620156 4529 ntTSL 5 BASIC9.57□□□□□ -0.88
ALDH1A1P00352 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
ALDH1A1P00352 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALDH1A1P00352 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC091825.1-201ENST00000622952 2621 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 MAPK10-382ENST00000642023 2369 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 OR2A20P-204ENST00000641121 2173 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC092375.2-201ENST00000567370 1665 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC009021.2-201ENST00000567401 1666 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 Y_RNA.3-201ENST00000362331 103 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 MIR146B-201ENST00000365699 73 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 RNA5SP18-201ENST00000390935 121 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC024937.2-201ENST00000411669 1242 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC008155.1-201ENST00000421078 329 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 MTND4P20-201ENST00000424125 869 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 FDPSP6-201ENST00000425091 512 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC124944.2-201ENST00000429866 1242 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 RPL12P15-201ENST00000433385 499 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 RPL15P1-201ENST00000439981 600 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC009961.3-201ENST00000449832 765 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 TPT1P1-201ENST00000458495 518 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 RN7SL308P-201ENST00000464971 297 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 RPL3P10-201ENST00000476002 1164 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC117394.1-201ENST00000477323 567 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 OR7E22P-201ENST00000478335 1035 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 RN7SL89P-201ENST00000480252 283 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 CEACAMP3-202ENST00000483806 638 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC010409.2-201ENST00000505780 478 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC108157.1-201ENST00000510511 539 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 IGLV10-67-201ENST00000519446 325 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 RN7SL381P-201ENST00000577658 298 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 MIR548S-201ENST00000581352 82 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC084373.1-201ENST00000603311 235 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC092106.3-201ENST00000611308 722 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 Z69908.1-201ENST00000622603 247 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC087893.2-201ENST00000623272 255 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC124312.6-202ENST00000623624 418 ntBASIC9.56□□□□□ -0.88
ALDH1A1P00352 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC9.56□□□□□ -0.88
ALDH1A1P00352 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 CASP4-203ENST00000444739 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALDH1A1P00352 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 ANKRD36P1-201ENST00000344424 659 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 MIR27A-201ENST00000385073 78 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 AL139039.2-201ENST00000407436 479 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 RN7SKP278-201ENST00000410504 342 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 AL049758.1-201ENST00000423154 397 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
ALDH1A1P00352 CYP2C56P-201ENST00000440076 291 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 PHBP9-201ENST00000453578 825 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC9.55□□□□□ -0.88
ALDH1A1P00352 RPL32P14-201ENST00000463196 378 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 MTND3P7-201ENST00000474435 343 ntBASIC9.55□□□□□ -0.88
ALDH1A1P00352 AC080014.1-201ENST00000496877 1201 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms