Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 LILRB1-205ENST00000396331 2960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 BTN2A3P-201ENST00000377662 1836 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 GIMAP4-201ENST00000255945 2060 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RAET1E-207ENST00000532335 2099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 SERPINB2-205ENST00000457692 2155 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 GRIA1-201ENST00000285900 5708 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC244034.3-201ENST00000624347 3135 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RPE-201ENST00000354506 3165 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 Y_RNA.256-201ENST00000364594 104 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 Y_RNA.554-201ENST00000384672 102 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 HSPD1P10-201ENST00000404829 1676 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC009237.5-201ENST00000414271 501 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RNF19BPX-201ENST00000426224 625 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC000111.3-201ENST00000433478 193 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RBMY1A1-204ENST00000439108 1879 ntAPPRIS P5 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 HMGB3P6-201ENST00000444896 598 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 RPL5P10-201ENST00000445207 894 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RPL6P5-201ENST00000445678 828 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 MTCO2P25-201ENST00000447065 681 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 MTND4P27-201ENST00000450813 1354 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 Z95152.1-201ENST00000453556 656 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RPL21P47-201ENST00000483696 477 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL031864.2-201ENST00000498507 350 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC087359.1-201ENST00000508335 1740 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC097460.2-201ENST00000511857 741 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RN7SKP197-201ENST00000517077 297 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 TDGF1P5-201ENST00000523009 453 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 RN7SL25P-201ENST00000583862 260 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 WISP1-OT1-201ENST00000602893 642 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 LLPHP1-201ENST00000603571 367 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AL008582.1-201ENST00000609612 442 ntBASIC9.69□□□□□ -0.86
LRCH3Q96II8 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LRCH3Q96II8 AC020661.5-201ENST00000624853 1854 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms