Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC7.18□□□□□ -1.26
SKP1P63208 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SKP1P63208 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SKP1P63208 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.18□□□□□ -1.26
SKP1P63208 OR5AU1-204ENST00000641822 1197 ntBASIC7.18□□□□□ -1.26
SKP1P63208 AL606490.2-201ENST00000457562 1330 ntBASIC7.18□□□□□ -1.26
SKP1P63208 TATDN2P1-201ENST00000443767 2331 ntBASIC7.18□□□□□ -1.26
SKP1P63208 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SKP1P63208 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.18□□□□□ -1.26
SKP1P63208 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.18□□□□□ -1.26
SKP1P63208 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.18□□□□□ -1.26
SKP1P63208 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.18□□□□□ -1.26
SKP1P63208 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SKP1P63208 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 AC090132.1-201ENST00000524071 1480 ntBASIC7.17□□□□□ -1.26
SKP1P63208 NBPF8-201ENST00000583271 5330 ntBASIC7.17□□□□□ -1.26
SKP1P63208 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SKP1P63208 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.17□□□□□ -1.26
SKP1P63208 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SKP1P63208 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 RN7SKP211-201ENST00000363328 315 ntBASIC7.17□□□□□ -1.26
SKP1P63208 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SKP1P63208 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 PPIAP30-201ENST00000415473 519 ntBASIC7.17□□□□□ -1.26
SKP1P63208 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.17□□□□□ -1.26
SKP1P63208 RN7SL91P-201ENST00000469313 291 ntBASIC7.17□□□□□ -1.26
SKP1P63208 AC005550.2-201ENST00000476382 318 ntBASIC7.17□□□□□ -1.26
SKP1P63208 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
SKP1P63208 NPY6R-201ENST00000503807 1112 ntBASIC7.17□□□□□ -1.26
SKP1P63208 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC7.17□□□□□ -1.26
SKP1P63208 AC008677.3-201ENST00000519146 666 ntBASIC7.17□□□□□ -1.26
SKP1P63208 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.17□□□□□ -1.26
SKP1P63208 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.17□□□□□ -1.26
SKP1P63208 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.17□□□□□ -1.26
SKP1P63208 AL451085.1-201ENST00000604546 690 ntBASIC7.17□□□□□ -1.26
SKP1P63208 RPS28P1-201ENST00000604589 187 ntBASIC7.17□□□□□ -1.26
SKP1P63208 CUX2P1-201ENST00000606426 298 ntBASIC7.17□□□□□ -1.26
SKP1P63208 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 FAM27E3-202ENST00000614611 340 ntBASIC7.17□□□□□ -1.26
SKP1P63208 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 AC123769.2-201ENST00000624332 5984 ntBASIC7.17□□□□□ -1.26
SKP1P63208 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SKP1P63208 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 AC089998.1-201ENST00000548575 3141 ntBASIC7.17□□□□□ -1.26
SKP1P63208 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SKP1P63208 MAPK10-347ENST00000641762 2856 ntBASIC7.17□□□□□ -1.26
SKP1P63208 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.17□□□□□ -1.26
SKP1P63208 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
SKP1P63208 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SKP1P63208 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SKP1P63208 VEZF1P1-201ENST00000423931 1541 ntBASIC7.17□□□□□ -1.26
SKP1P63208 MFSD8-227ENST00000641393 4069 ntBASIC7.17□□□□□ -1.26
SKP1P63208 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SKP1P63208 MAPK10-281ENST00000641170 3070 ntBASIC7.16□□□□□ -1.26
SKP1P63208 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SKP1P63208 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms