Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AC016930.1-201ENST00000468766 2205 ntBASIC7□□□□□ -1.29
SUMO3P55854 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SUMO3P55854 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC025040.2-201ENST00000558657 1852 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC6.99□□□□□ -1.29
SUMO3P55854 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 FECHP1-201ENST00000431896 1214 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 RPL17P35-201ENST00000432217 549 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AL392003.1-201ENST00000434394 243 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 FTH1P7-201ENST00000450676 552 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 C1DP3-201ENST00000455013 423 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 CYCSP53-201ENST00000455540 265 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 RN7SL869P-201ENST00000497032 300 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AC114300.1-201ENST00000502347 280 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC117525.1-201ENST00000515228 503 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AC087360.1-201ENST00000518788 616 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC6.99□□□□□ -1.29
SUMO3P55854 CHCHD3P2-201ENST00000550751 639 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AL136520.1-202ENST00000555494 763 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.99□□□□□ -1.29
SUMO3P55854 RN7SL237P-201ENST00000580912 287 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.99□□□□□ -1.29
SUMO3P55854 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.99□□□□□ -1.29
SUMO3P55854 AP000436.1-201ENST00000605239 800 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.99□□□□□ -1.29
SUMO3P55854 AC016542.1-201ENST00000608259 493 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AL451054.1-201ENST00000621770 772 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 AL353608.4-201ENST00000624487 1188 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 AC073857.1-201ENST00000625082 1054 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 LINC02035-201ENST00000610128 5476 ntBASIC6.99□□□□□ -1.29
SUMO3P55854 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SUMO3P55854 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
SUMO3P55854 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SUMO3P55854 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SUMO3P55854 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SUMO3P55854 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 CASC19-255ENST00000641733 1385 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 GUCY2GP-201ENST00000479705 3222 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AL137918.1-201ENST00000624542 1922 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SUMO3P55854 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.98□□□□□ -1.29
SUMO3P55854 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SUMO3P55854 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 MSRB1P1-201ENST00000396851 354 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 AL355375.1-201ENST00000405686 392 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.98□□□□□ -1.29
SUMO3P55854 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SUMO3P55854 GNAI2P2-201ENST00000417003 916 ntBASIC6.98□□□□□ -1.29
SUMO3P55854 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.98□□□□□ -1.29
SUMO3P55854 AL445528.1-201ENST00000426330 420 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms