Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
POLR2AP24928 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
POLR2AP24928 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC8.58□□□□□ -1.04
POLR2AP24928 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 AC110048.2-201ENST00000617013 6721 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 AC068860.1-201ENST00000623701 3736 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 RN7SKP55-201ENST00000364888 307 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 SNORA7A-201ENST00000384765 139 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 SPATA20P1-201ENST00000423089 438 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 NAP1L4P2-201ENST00000425958 899 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC009518.3-201ENST00000438972 253 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AL031681.1-201ENST00000443304 400 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.57□□□□□ -1.04
POLR2AP24928 OR4N3P-201ENST00000559395 818 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AL390877.1-201ENST00000605704 214 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC005828.7-201ENST00000607331 556 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 MIR6849-201ENST00000618543 69 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC135068.4-201ENST00000622949 925 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.57□□□□□ -1.04
POLR2AP24928 AC087894.3-201ENST00000623682 349 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AL022323.3-201ENST00000623888 5388 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.57□□□□□ -1.04
POLR2AP24928 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.57□□□□□ -1.04
POLR2AP24928 AP003471.1-202ENST00000319051 1988 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
POLR2AP24928 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 MAPK10-279ENST00000641157 2449 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 RNA5SP472-201ENST00000363868 119 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 RN7SKP38-201ENST00000410782 309 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.57□□□□□ -1.04
POLR2AP24928 ARMC4P1-201ENST00000438905 707 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC118758.1-202ENST00000454719 225 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC114324.2-202ENST00000503812 134 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 GUSBP9-201ENST00000510138 584 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.57□□□□□ -1.04
POLR2AP24928 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.57□□□□□ -1.04
POLR2AP24928 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.57□□□□□ -1.04
POLR2AP24928 MT1CP-201ENST00000567054 174 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 AC011891.2-201ENST00000604949 397 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC8.57□□□□□ -1.04
POLR2AP24928 uc_338.29-201ENST00000615099 168 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 NLRP9P1-201ENST00000540920 2655 ntBASIC8.57□□□□□ -1.04
POLR2AP24928 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.57□□□□□ -1.04
POLR2AP24928 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
POLR2AP24928 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 AC092999.1-201ENST00000624004 1924 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 RNU1-5P-201ENST00000362684 144 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 RNA5SP188-201ENST00000362916 129 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
POLR2AP24928 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
POLR2AP24928 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 SNRPEP5-201ENST00000425442 278 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.56□□□□□ -1.04
POLR2AP24928 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.56□□□□□ -1.04
POLR2AP24928 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.56□□□□□ -1.04
POLR2AP24928 AKR1D1P1-201ENST00000457236 936 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.56□□□□□ -1.04
POLR2AP24928 AC117529.1-201ENST00000505789 2023 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 RN7SL753P-201ENST00000581238 290 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 MIR4271-201ENST00000582451 67 ntBASIC8.56□□□□□ -1.04
POLR2AP24928 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
POLR2AP24928 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms