Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP000766.1-201ENST00000561746 4140 ntBASIC7.09□□□□□ -1.27
SCN2BO60939 NBPF8-201ENST00000583271 5330 ntBASIC7.09□□□□□ -1.27
SCN2BO60939 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.09□□□□□ -1.27
SCN2BO60939 AL133320.1-201ENST00000621423 2352 ntBASIC7.09□□□□□ -1.28
SCN2BO60939 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.09□□□□□ -1.28
SCN2BO60939 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.09□□□□□ -1.28
SCN2BO60939 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 TRIM64EP-201ENST00000531233 1307 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 OR5E1P-201ENST00000305754 927 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 SSX6-201ENST00000376932 562 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SCN2BO60939 RN7SKP225-201ENST00000410405 352 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.08□□□□□ -1.28
SCN2BO60939 AL354794.2-201ENST00000424795 1248 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 AL021939.1-201ENST00000441868 886 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 RN7SL332P-201ENST00000482163 254 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 RN7SL869P-201ENST00000497032 300 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 NPY6R-201ENST00000503807 1112 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 NMNAT1P4-201ENST00000505598 840 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 IGLVI-70-201ENST00000523272 390 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 SAA3P-201ENST00000533267 365 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 CHCHD3P2-201ENST00000550751 639 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.08□□□□□ -1.28
SCN2BO60939 AC233699.1-201ENST00000569955 1168 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 AC090415.1-201ENST00000581877 847 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.08□□□□□ -1.28
SCN2BO60939 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC7.08□□□□□ -1.28
SCN2BO60939 AC018737.1-201ENST00000603900 204 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.08□□□□□ -1.28
SCN2BO60939 RPL36AP21-202ENST00000639134 430 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.08□□□□□ -1.28
SCN2BO60939 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 AC011379.1-201ENST00000508713 3025 ntBASIC7.08□□□□□ -1.28
SCN2BO60939 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.08□□□□□ -1.28
SCN2BO60939 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.08□□□□□ -1.28
SCN2BO60939 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCN2BO60939 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 BX322650.1-201ENST00000332359 2143 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.07□□□□□ -1.28
SCN2BO60939 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SCN2BO60939 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 PPIAP22-201ENST00000358455 498 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 IGLC6-201ENST00000410078 317 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 DDX11L10-201ENST00000430178 571 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 RPL34P29-201ENST00000491411 325 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 RN7SL635P-201ENST00000492123 296 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC087360.1-201ENST00000518788 616 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.07□□□□□ -1.28
SCN2BO60939 RN7SL376P-201ENST00000578594 264 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 AC010719.1-201ENST00000602992 747 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.07□□□□□ -1.28
SCN2BO60939 AC239600.2-201ENST00000619615 1165 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 RN7SL680P-201ENST00000620379 299 ntBASIC7.07□□□□□ -1.28
SCN2BO60939 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.07□□□□□ -1.28
SCN2BO60939 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.07□□□□□ -1.28
SCN2BO60939 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCN2BO60939 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms