Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TNFRSF11AQ9Y6Q6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNFRSF11AQ9Y6Q6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 KRT8P17-201ENST00000453110 1448 ntBASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 GCSHP5-201ENST00000443090 522 ntBASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.64■■□□□ 1.54
TNFRSF11AQ9Y6Q6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TNFRSF11AQ9Y6Q6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
TNFRSF11AQ9Y6Q6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.64■■□□□ 1.53
TNFRSF11AQ9Y6Q6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TNFRSF11AQ9Y6Q6 GABARAPL3-202ENST00000624044 1851 ntBASIC24.64■■□□□ 1.53
TNFRSF11AQ9Y6Q6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 AL031963.3-201ENST00000606441 850 ntBASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.63■■□□□ 1.53
TNFRSF11AQ9Y6Q6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNFRSF11AQ9Y6Q6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 AC112907.3-201ENST00000577781 2400 ntBASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 RN7SL471P-201ENST00000580476 299 ntBASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 MTDHP1-201ENST00000605323 784 ntBASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.61■■□□□ 1.53
TNFRSF11AQ9Y6Q6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TNFRSF11AQ9Y6Q6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.6■■□□□ 1.53
TNFRSF11AQ9Y6Q6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TNFRSF11AQ9Y6Q6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.6■■□□□ 1.53
TNFRSF11AQ9Y6Q6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms