Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 NIFKP9-201ENST00000419265 221 ntBASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 KSR1P1-201ENST00000446298 240 ntBASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 AC116562.2-201ENST00000507042 360 ntBASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 FITM1-202ENST00000559294 800 ntBASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 AC010947.1-201ENST00000623454 693 ntBASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC2Q9Y5Z7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 KRT18P22-201ENST00000402024 1347 ntBASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 TERF1P1-201ENST00000311003 1181 ntBASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 HLA-G-202ENST00000376815 851 ntBASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 HLA-G-203ENST00000376818 1127 ntBASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.08■□□□□ 0.97
HCFC2Q9Y5Z7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.08■□□□□ 0.96
HCFC2Q9Y5Z7 PTBP1P-201ENST00000554374 1601 ntBASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 AL137013.1-201ENST00000432946 1228 ntBASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC2Q9Y5Z7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 KRT16P1-201ENST00000399124 1418 ntBASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 AC073508.3-201ENST00000619697 1419 ntBASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 AC244015.2-201ENST00000616358 1861 ntBASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC2Q9Y5Z7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.05■□□□□ 0.96
HCFC2Q9Y5Z7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms