Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 AC128676.1-201ENST00000454392 318 ntBASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX9Q9Y5X1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 AC073648.6-201ENST00000641589 218 ntBASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 AC020907.5-201ENST00000624372 1936 ntBASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX9Q9Y5X1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 KRT8P20-201ENST00000423953 1409 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 HLA-G-202ENST00000376815 851 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 HLA-G-203ENST00000376818 1127 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 KRT17P3-201ENST00000420566 1262 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 POM121L13P-201ENST00000422362 380 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 AL031963.3-201ENST00000606441 850 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 AC120498.8-201ENST00000614275 531 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX9Q9Y5X1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 PRORSD1P-201ENST00000295112 541 ntBASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.47■■□□□ 1.03
SNX9Q9Y5X1 KRT8P17-201ENST00000453110 1448 ntBASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 AP005212.1-201ENST00000581547 1997 ntBASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SNX9Q9Y5X1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNX9Q9Y5X1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms