Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 UNC93B5-201ENST00000530315 699 ntBASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 FAM21FP-204ENST00000608637 956 ntBASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 AP003097.1-201ENST00000530657 1135 ntBASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 AC073648.6-201ENST00000641589 218 ntBASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA4Q9Y5G9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 PLK5-205ENST00000642079 1969 ntBASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA4Q9Y5G9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA4Q9Y5G9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA4Q9Y5G9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms