Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RARRES2P10-201ENST00000564312 460 ntBASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 LINC01521-201ENST00000504184 1943 ntBASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 AC092667.1-201ENST00000434301 2586 ntBASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA9Q9Y5G4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGA9Q9Y5G4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA9Q9Y5G4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA9Q9Y5G4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 KRASP1-201ENST00000407852 552 ntBASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 AL356652.1-201ENST00000615962 565 ntBASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA9Q9Y5G4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 AC006557.6-201ENST00000623071 864 ntBASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA9Q9Y5G4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA9Q9Y5G4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms