Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 AC012306.2-201ENST00000609350 630 ntBASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
PCDHB7Q9Y5E2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 MMP23A-201ENST00000234610 1017 ntBASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 AP002982.1-201ENST00000492365 877 ntBASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 AL353708.3-201ENST00000610272 989 ntBASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 KRT8P20-201ENST00000423953 1409 ntBASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB7Q9Y5E2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB7Q9Y5E2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 EP400NL-214ENST00000641289 2402 ntBASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB7Q9Y5E2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AL031963.3-201ENST00000606441 850 ntBASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB7Q9Y5E2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDHB7Q9Y5E2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB7Q9Y5E2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB7Q9Y5E2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHB7Q9Y5E2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHB7Q9Y5E2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB7Q9Y5E2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms