Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHB9Q9Y5E1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 HLA-B-256ENST00000639848 1089 ntBASIC20.39■□□□□ 0.85
PCDHB9Q9Y5E1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 AC008403.3-201ENST00000598924 454 ntBASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 AC073314.1-201ENST00000568729 2216 ntBASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDHB9Q9Y5E1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 FAM210CP-201ENST00000445714 574 ntBASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB9Q9Y5E1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB9Q9Y5E1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 AC211429.1-201ENST00000415277 523 ntBASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 LINC01023-201ENST00000606054 436 ntBASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB9Q9Y5E1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms