Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
HES2Q9Y543 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.77■■□□□ 1.08
HES2Q9Y543 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.77■■□□□ 1.08
HES2Q9Y543 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
HES2Q9Y543 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.77■■□□□ 1.08
HES2Q9Y543 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.77■■□□□ 1.08
HES2Q9Y543 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HES2Q9Y543 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HES2Q9Y543 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HES2Q9Y543 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HES2Q9Y543 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.77■■□□□ 1.07
HES2Q9Y543 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.76■■□□□ 1.07
HES2Q9Y543 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.76■■□□□ 1.07
HES2Q9Y543 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.76■■□□□ 1.07
HES2Q9Y543 AC110285.5-201ENST00000611501 352 ntBASIC21.76■■□□□ 1.07
HES2Q9Y543 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.76■■□□□ 1.07
HES2Q9Y543 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.76■■□□□ 1.07
HES2Q9Y543 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.76■■□□□ 1.07
HES2Q9Y543 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HES2Q9Y543 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.75■■□□□ 1.07
HES2Q9Y543 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.75■■□□□ 1.07
HES2Q9Y543 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 MIR718-201ENST00000390190 70 ntBASIC21.75■■□□□ 1.07
HES2Q9Y543 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.75■■□□□ 1.07
HES2Q9Y543 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.75■■□□□ 1.07
HES2Q9Y543 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.75■■□□□ 1.07
HES2Q9Y543 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.75■■□□□ 1.07
HES2Q9Y543 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
HES2Q9Y543 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HES2Q9Y543 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HES2Q9Y543 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.74■■□□□ 1.07
HES2Q9Y543 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.74■■□□□ 1.07
HES2Q9Y543 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.74■■□□□ 1.07
HES2Q9Y543 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.74■■□□□ 1.07
HES2Q9Y543 AL031963.3-201ENST00000606441 850 ntBASIC21.74■■□□□ 1.07
HES2Q9Y543 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
HES2Q9Y543 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
HES2Q9Y543 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HES2Q9Y543 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.74■■□□□ 1.07
HES2Q9Y543 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HES2Q9Y543 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HES2Q9Y543 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HES2Q9Y543 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HES2Q9Y543 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HES2Q9Y543 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HES2Q9Y543 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HES2Q9Y543 HLA-G-202ENST00000376815 851 ntBASIC21.73■■□□□ 1.07
HES2Q9Y543 HLA-G-203ENST00000376818 1127 ntBASIC21.73■■□□□ 1.07
HES2Q9Y543 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.73■■□□□ 1.07
HES2Q9Y543 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
HES2Q9Y543 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.73■■□□□ 1.07
HES2Q9Y543 SNORA78-201ENST00000459373 127 ntBASIC21.73■■□□□ 1.07
HES2Q9Y543 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.73■■□□□ 1.07
HES2Q9Y543 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms