Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 AC010203.1-204ENST00000548782 407 ntBASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTCBQ9Y3I0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTCBQ9Y3I0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.45■■□□□ 1.67
RTCBQ9Y3I0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTCBQ9Y3I0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RTCBQ9Y3I0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 AL031985.4-201ENST00000642138 673 ntBASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.45■■□□□ 1.66
RTCBQ9Y3I0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 LIN28AP1-201ENST00000429574 405 ntBASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 WWOX-216ENST00000569818 525 ntBASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 PTBP1P-201ENST00000554374 1601 ntBASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.44■■□□□ 1.66
RTCBQ9Y3I0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 GUSBP5-202ENST00000510805 1989 ntBASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTCBQ9Y3I0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 FSCN1P1-201ENST00000568912 1481 ntBASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 AC006011.2-201ENST00000621313 1158 ntBASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTCBQ9Y3I0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 MESTP1-201ENST00000404287 994 ntBASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 ATP5G1P1-201ENST00000448724 379 ntBASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 C2orf69P3-201ENST00000565542 1120 ntBASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.41■■□□□ 1.66
RTCBQ9Y3I0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 KRT8P20-201ENST00000423953 1409 ntBASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTCBQ9Y3I0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms