Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 AC066615.1-201ENST00000640911 628 ntBASIC21.58■■□□□ 1.05
UBQLN1Q9UMX0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
UBQLN1Q9UMX0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBQLN1Q9UMX0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBQLN1Q9UMX0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBQLN1Q9UMX0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBQLN1Q9UMX0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 AL121829.2-201ENST00000620908 328 ntBASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 FAM197Y4-202ENST00000622692 608 ntBASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 AC124283.5-201ENST00000624661 1809 ntBASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
UBQLN1Q9UMX0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBQLN1Q9UMX0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC239809.2-201ENST00000415381 517 ntBASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 UBE2SP1-201ENST00000450587 669 ntBASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 PRKY-204ENST00000533551 1019 ntBASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AL121906.2-201ENST00000621597 723 ntBASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AL023875.1-201ENST00000640777 796 ntBASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBQLN1Q9UMX0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBQLN1Q9UMX0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms