Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 PTBP1P-201ENST00000554374 1601 ntBASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CUEDC1Q9NWM3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CUEDC1Q9NWM3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CUEDC1Q9NWM3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 AL391422.3-201ENST00000603791 2761 ntBASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 PRORSD1P-201ENST00000295112 541 ntBASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUEDC1Q9NWM3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUEDC1Q9NWM3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.36■□□□□ 0.69
CUEDC1Q9NWM3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms