Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL445523.1-201ENST00000451184 1362 ntBASIC22.83■■□□□ 1.25
RNF216Q9NWF9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RNF216Q9NWF9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RNF216Q9NWF9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
RNF216Q9NWF9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RNF216Q9NWF9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 AC010980.2-201ENST00000587099 1412 ntBASIC22.82■■□□□ 1.24
RNF216Q9NWF9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF216Q9NWF9 Z98882.1-201ENST00000622160 2253 ntBASIC22.82■■□□□ 1.24
RNF216Q9NWF9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 AL121949.1-201ENST00000402043 968 ntBASIC22.81■■□□□ 1.24
RNF216Q9NWF9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 AC034229.4-201ENST00000607861 441 ntBASIC22.81■■□□□ 1.24
RNF216Q9NWF9 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 AL590396.2-201ENST00000636511 1041 ntBASIC22.81■■□□□ 1.24
RNF216Q9NWF9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF216Q9NWF9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 MTCYBP15-201ENST00000433123 1127 ntBASIC22.8■■□□□ 1.24
RNF216Q9NWF9 CT45A11P-201ENST00000448043 1134 ntBASIC22.8■■□□□ 1.24
RNF216Q9NWF9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 AC114322.1-201ENST00000506771 926 ntBASIC22.8■■□□□ 1.24
RNF216Q9NWF9 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC22.8■■□□□ 1.24
RNF216Q9NWF9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF216Q9NWF9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 AC092667.1-201ENST00000434301 2586 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 BTG3P1-201ENST00000435859 716 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 ART2BP-201ENST00000453501 499 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 AP001981.1-201ENST00000531132 738 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 AL109924.4-201ENST00000623089 670 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 MYC-209ENST00000641252 345 ntBASIC22.79■■□□□ 1.24
RNF216Q9NWF9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF216Q9NWF9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 AC092964.1-201ENST00000623304 1399 ntBASIC22.78■■□□□ 1.24
RNF216Q9NWF9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 CDV3P1-201ENST00000471403 739 ntBASIC22.78■■□□□ 1.24
RNF216Q9NWF9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.78■■□□□ 1.24
RNF216Q9NWF9 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms