Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM248Q9NWD8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 MIR4651-201ENST00000582622 73 ntBASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 AC008403.3-201ENST00000598924 454 ntBASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TMEM248Q9NWD8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 AC026366.1-201ENST00000488803 879 ntBASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 AP003097.1-201ENST00000530657 1135 ntBASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM248Q9NWD8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM248Q9NWD8 KRT16P6-202ENST00000425692 1426 ntBASIC20.52■□□□□ 0.87
TMEM248Q9NWD8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM248Q9NWD8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 AC008687.6-201ENST00000596318 630 ntBASIC20.51■□□□□ 0.87
TMEM248Q9NWD8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms