Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 SLC7A5P1-201ENST00000568957 537 ntBASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 AC243732.1-201ENST00000612648 864 ntBASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 AL512408.1-201ENST00000569378 2000 ntBASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB16Q9NRJ7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 AC104187.1-201ENST00000607510 612 ntBASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB16Q9NRJ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 ZNRF2P3-201ENST00000424200 374 ntBASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 FAM21FP-204ENST00000608637 956 ntBASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 BX323043.1-201ENST00000641006 1765 ntBASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB16Q9NRJ7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB16Q9NRJ7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB16Q9NRJ7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms