Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS4Q9NQG7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 KRT8P36-201ENST00000489121 1440 ntBASIC20.78■□□□□ 0.92
HPS4Q9NQG7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 TSPY15P-201ENST00000457163 923 ntBASIC20.78■□□□□ 0.92
HPS4Q9NQG7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 RARRES2P10-201ENST00000564312 460 ntBASIC20.78■□□□□ 0.92
HPS4Q9NQG7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 AL135905.2-201ENST00000584934 1404 ntBASIC20.78■□□□□ 0.92
HPS4Q9NQG7 KRT17P2-201ENST00000300992 1314 ntBASIC20.78■□□□□ 0.92
HPS4Q9NQG7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS4Q9NQG7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 AP001412.1-201ENST00000608405 714 ntBASIC20.77■□□□□ 0.92
HPS4Q9NQG7 MIR2861-201ENST00000636310 90 ntBASIC20.77■□□□□ 0.92
HPS4Q9NQG7 Z98882.1-201ENST00000622160 2253 ntBASIC20.77■□□□□ 0.92
HPS4Q9NQG7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS4Q9NQG7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPS4Q9NQG7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HPS4Q9NQG7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.77■□□□□ 0.91
HPS4Q9NQG7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPS4Q9NQG7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 AC023632.3-201ENST00000521633 145 ntBASIC20.76■□□□□ 0.91
HPS4Q9NQG7 PRKY-204ENST00000533551 1019 ntBASIC20.76■□□□□ 0.91
HPS4Q9NQG7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS4Q9NQG7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.75■□□□□ 0.91
HPS4Q9NQG7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS4Q9NQG7 AC124283.5-201ENST00000624661 1809 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms