Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 C2orf69P4-201ENST00000565394 541 ntBASIC20.1■□□□□ 0.81
MRM3Q9HC36 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MRM3Q9HC36 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRM3Q9HC36 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.09■□□□□ 0.81
MRM3Q9HC36 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.09■□□□□ 0.81
MRM3Q9HC36 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 KRT17P1-201ENST00000399211 1546 ntBASIC20.09■□□□□ 0.81
MRM3Q9HC36 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 CDCA4P2-201ENST00000441182 718 ntBASIC20.09■□□□□ 0.81
MRM3Q9HC36 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.09■□□□□ 0.81
MRM3Q9HC36 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRM3Q9HC36 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRM3Q9HC36 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 AC023632.3-201ENST00000521633 145 ntBASIC20.08■□□□□ 0.81
MRM3Q9HC36 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.08■□□□□ 0.81
MRM3Q9HC36 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MRM3Q9HC36 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRM3Q9HC36 KRT16P6-202ENST00000425692 1426 ntBASIC20.08■□□□□ 0.8
MRM3Q9HC36 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MRM3Q9HC36 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.08■□□□□ 0.8
MRM3Q9HC36 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
MRM3Q9HC36 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.08■□□□□ 0.8
MRM3Q9HC36 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MRM3Q9HC36 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRM3Q9HC36 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.07■□□□□ 0.8
MRM3Q9HC36 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.07■□□□□ 0.8
MRM3Q9HC36 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.07■□□□□ 0.8
MRM3Q9HC36 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
MRM3Q9HC36 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.07■□□□□ 0.8
MRM3Q9HC36 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MRM3Q9HC36 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.06■□□□□ 0.8
MRM3Q9HC36 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
MRM3Q9HC36 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 HLA-G-202ENST00000376815 851 ntBASIC20.06■□□□□ 0.8
MRM3Q9HC36 HLA-G-203ENST00000376818 1127 ntBASIC20.06■□□□□ 0.8
MRM3Q9HC36 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.06■□□□□ 0.8
MRM3Q9HC36 RAP2CP1-201ENST00000605103 478 ntBASIC20.06■□□□□ 0.8
MRM3Q9HC36 AL050303.2-201ENST00000619798 666 ntBASIC20.06■□□□□ 0.8
MRM3Q9HC36 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRM3Q9HC36 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MRM3Q9HC36 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
MRM3Q9HC36 AC125437.2-201ENST00000625180 2167 ntBASIC20.05■□□□□ 0.8
MRM3Q9HC36 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms