Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 AC125437.2-201ENST00000625180 2167 ntBASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM1Q9HBL6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM1Q9HBL6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 MFSD11-216ENST00000590393 1141 ntBASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM1Q9HBL6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRTM1Q9HBL6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRTM1Q9HBL6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.67
LRTM1Q9HBL6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRTM1Q9HBL6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 KRT18P5-201ENST00000436075 1291 ntBASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM1Q9HBL6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms