Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF41Q9H4P4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 AC008687.6-201ENST00000596318 630 ntBASIC23.68■■□□□ 1.38
RNF41Q9H4P4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 AL162377.1-201ENST00000618844 1793 ntBASIC23.68■■□□□ 1.38
RNF41Q9H4P4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF41Q9H4P4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 AL512408.1-201ENST00000569378 2000 ntBASIC23.67■■□□□ 1.38
RNF41Q9H4P4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 POU5F1P3-201ENST00000428824 1078 ntBASIC23.67■■□□□ 1.38
RNF41Q9H4P4 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 AC008403.3-201ENST00000598924 454 ntBASIC23.67■■□□□ 1.38
RNF41Q9H4P4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 LINC01006-201ENST00000333319 2292 ntBASIC23.67■■□□□ 1.38
RNF41Q9H4P4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 KRT16P6-202ENST00000425692 1426 ntBASIC23.67■■□□□ 1.38
RNF41Q9H4P4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF41Q9H4P4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 AL157384.1-201ENST00000445995 2473 ntBASIC23.66■■□□□ 1.38
RNF41Q9H4P4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 AC120498.8-201ENST00000614275 531 ntBASIC23.66■■□□□ 1.38
RNF41Q9H4P4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 AC092667.1-201ENST00000434301 2586 ntBASIC23.66■■□□□ 1.38
RNF41Q9H4P4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF41Q9H4P4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 TSPY20P-201ENST00000450910 630 ntBASIC23.65■■□□□ 1.38
RNF41Q9H4P4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 FAM201B-201ENST00000458407 597 ntBASIC23.65■■□□□ 1.38
RNF41Q9H4P4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.65■■□□□ 1.38
RNF41Q9H4P4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms