Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 AC026471.1-201ENST00000564629 3026 ntBASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TUBA1CQ9BQE3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 SLC7A5P1-201ENST00000568957 537 ntBASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TUBA1CQ9BQE3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
TUBA1CQ9BQE3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 AC121338.2-201ENST00000622535 1744 ntBASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 AC120498.10-201ENST00000621827 505 ntBASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TUBA1CQ9BQE3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TUBA1CQ9BQE3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 NCF1B-203ENST00000435988 1254 ntBASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 CNN2P6-201ENST00000439038 900 ntBASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 AC005181.1-201ENST00000604782 1256 ntBASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 AL050303.2-201ENST00000619798 666 ntBASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TUBA1CQ9BQE3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms