Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
ABCA3Q99758 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
ABCA3Q99758 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC26.97■■□□□ 1.91
ABCA3Q99758 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.97■■□□□ 1.91
ABCA3Q99758 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCA3Q99758 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.97■■□□□ 1.91
ABCA3Q99758 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.97■■□□□ 1.91
ABCA3Q99758 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
ABCA3Q99758 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA3Q99758 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 AC009947.2-201ENST00000444014 672 ntBASIC26.96■■□□□ 1.91
ABCA3Q99758 YBX1P10-201ENST00000444752 975 ntBASIC26.96■■□□□ 1.91
ABCA3Q99758 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC26.96■■□□□ 1.91
ABCA3Q99758 ATP5G1P1-201ENST00000448724 379 ntBASIC26.96■■□□□ 1.91
ABCA3Q99758 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
ABCA3Q99758 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.96■■□□□ 1.91
ABCA3Q99758 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA3Q99758 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA3Q99758 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.96■■□□□ 1.91
ABCA3Q99758 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
ABCA3Q99758 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
ABCA3Q99758 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.96■■□□□ 1.91
ABCA3Q99758 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.96■■□□□ 1.91
ABCA3Q99758 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ABCA3Q99758 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
ABCA3Q99758 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
ABCA3Q99758 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.95■■□□□ 1.91
ABCA3Q99758 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.95■■□□□ 1.91
ABCA3Q99758 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA3Q99758 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA3Q99758 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA3Q99758 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
ABCA3Q99758 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA3Q99758 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA3Q99758 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA3Q99758 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
ABCA3Q99758 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
ABCA3Q99758 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.95■■□□□ 1.9
ABCA3Q99758 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC26.95■■□□□ 1.9
ABCA3Q99758 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
ABCA3Q99758 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA3Q99758 AC128688.1-201ENST00000487626 519 ntBASIC26.94■■□□□ 1.9
ABCA3Q99758 YBX1P2-201ENST00000489612 999 ntBASIC26.94■■□□□ 1.9
ABCA3Q99758 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.94■■□□□ 1.9
ABCA3Q99758 EGLN1P1-201ENST00000531623 762 ntBASIC26.94■■□□□ 1.9
ABCA3Q99758 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ABCA3Q99758 LINC01238-205ENST00000567549 1107 ntBASIC26.94■■□□□ 1.9
ABCA3Q99758 AC091076.1-201ENST00000610741 619 ntBASIC26.94■■□□□ 1.9
ABCA3Q99758 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
ABCA3Q99758 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.94■■□□□ 1.9
ABCA3Q99758 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC26.94■■□□□ 1.9
ABCA3Q99758 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC26.94■■□□□ 1.9
ABCA3Q99758 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA3Q99758 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA3Q99758 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.93■■□□□ 1.9
ABCA3Q99758 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
ABCA3Q99758 AC011506.1-201ENST00000474329 610 ntBASIC26.93■■□□□ 1.9
ABCA3Q99758 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA3Q99758 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA3Q99758 AP000550.4-202ENST00000639755 178 ntBASIC26.93■■□□□ 1.9
ABCA3Q99758 AC011484.1-201ENST00000377652 1995 ntBASIC26.93■■□□□ 1.9
ABCA3Q99758 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA3Q99758 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC26.93■■□□□ 1.9
ABCA3Q99758 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC26.93■■□□□ 1.9
ABCA3Q99758 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA3Q99758 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ABCA3Q99758 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.93■■□□□ 1.9
ABCA3Q99758 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.93■■□□□ 1.9
ABCA3Q99758 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
ABCA3Q99758 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.93■■□□□ 1.9
ABCA3Q99758 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 HMGA1P5-201ENST00000412453 271 ntBASIC26.92■■□□□ 1.9
ABCA3Q99758 AC004980.1-204ENST00000429707 299 ntBASIC26.92■■□□□ 1.9
ABCA3Q99758 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ABCA3Q99758 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA3Q99758 KRT18P56-201ENST00000507275 550 ntBASIC26.92■■□□□ 1.9
ABCA3Q99758 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA3Q99758 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.92■■□□□ 1.9
ABCA3Q99758 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA3Q99758 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.92■■□□□ 1.9
ABCA3Q99758 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ABCA3Q99758 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ABCA3Q99758 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.91■■□□□ 1.9
ABCA3Q99758 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
ABCA3Q99758 KRT18P48-201ENST00000434763 852 ntBASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms