Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.28■□□□□ 0.52
NPAS1Q99742 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS1Q99742 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.28■□□□□ 0.52
NPAS1Q99742 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.28■□□□□ 0.52
NPAS1Q99742 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
NPAS1Q99742 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS1Q99742 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS1Q99742 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NPAS1Q99742 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS1Q99742 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
NPAS1Q99742 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.27■□□□□ 0.52
NPAS1Q99742 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.27■□□□□ 0.52
NPAS1Q99742 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.27■□□□□ 0.52
NPAS1Q99742 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAS1Q99742 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NPAS1Q99742 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS1Q99742 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS1Q99742 AL162377.1-201ENST00000618844 1793 ntBASIC18.27■□□□□ 0.51
NPAS1Q99742 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS1Q99742 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
NPAS1Q99742 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAS1Q99742 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
NPAS1Q99742 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAS1Q99742 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAS1Q99742 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 AC112907.3-201ENST00000577781 2400 ntBASIC18.26■□□□□ 0.51
NPAS1Q99742 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.26■□□□□ 0.51
NPAS1Q99742 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.26■□□□□ 0.51
NPAS1Q99742 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS1Q99742 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS1Q99742 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NPAS1Q99742 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NPAS1Q99742 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NPAS1Q99742 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS1Q99742 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.25■□□□□ 0.51
NPAS1Q99742 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS1Q99742 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.25■□□□□ 0.51
NPAS1Q99742 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.25■□□□□ 0.51
NPAS1Q99742 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.25■□□□□ 0.51
NPAS1Q99742 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS1Q99742 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS1Q99742 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS1Q99742 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS1Q99742 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.24■□□□□ 0.51
NPAS1Q99742 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.24■□□□□ 0.51
NPAS1Q99742 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.24■□□□□ 0.51
NPAS1Q99742 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.24■□□□□ 0.51
NPAS1Q99742 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms