Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP4Q99569 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PKP4Q99569 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PKP4Q99569 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.54■□□□□ 0.72
PKP4Q99569 AC069152.1-201ENST00000438030 544 ntBASIC19.54■□□□□ 0.72
PKP4Q99569 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.54■□□□□ 0.72
PKP4Q99569 AC097658.1-201ENST00000475555 843 ntBASIC19.54■□□□□ 0.72
PKP4Q99569 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.54■□□□□ 0.72
PKP4Q99569 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.54■□□□□ 0.72
PKP4Q99569 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PKP4Q99569 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.54■□□□□ 0.72
PKP4Q99569 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.54■□□□□ 0.72
PKP4Q99569 MYC-209ENST00000641252 345 ntBASIC19.54■□□□□ 0.72
PKP4Q99569 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PKP4Q99569 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP4Q99569 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.54■□□□□ 0.72
PKP4Q99569 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PKP4Q99569 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.53■□□□□ 0.72
PKP4Q99569 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PKP4Q99569 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PKP4Q99569 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PKP4Q99569 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PKP4Q99569 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.53■□□□□ 0.72
PKP4Q99569 AC073210.2-201ENST00000430369 194 ntBASIC19.53■□□□□ 0.72
PKP4Q99569 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.53■□□□□ 0.72
PKP4Q99569 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.53■□□□□ 0.72
PKP4Q99569 AC133041.1-202ENST00000642053 222 ntBASIC19.53■□□□□ 0.72
PKP4Q99569 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
PKP4Q99569 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PKP4Q99569 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PKP4Q99569 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
PKP4Q99569 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PKP4Q99569 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PKP4Q99569 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PKP4Q99569 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.52■□□□□ 0.72
PKP4Q99569 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.52■□□□□ 0.72
PKP4Q99569 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PKP4Q99569 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PKP4Q99569 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PKP4Q99569 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.52■□□□□ 0.71
PKP4Q99569 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
PKP4Q99569 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 KRT8P17-201ENST00000453110 1448 ntBASIC19.51■□□□□ 0.71
PKP4Q99569 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.51■□□□□ 0.71
PKP4Q99569 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 AC112907.3-201ENST00000577781 2400 ntBASIC19.51■□□□□ 0.71
PKP4Q99569 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
PKP4Q99569 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PKP4Q99569 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms