Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 IRC2YDR112W 309 nt-0.77□□□□□ -2.53
TY1B-DR3Q99231 YFR057WYFR057W 456 nt-0.77□□□□□ -2.53
TY1B-DR3Q99231 YJR140W-AYJR140W-A 150 nt-0.77□□□□□ -2.53
TY1B-DR3Q99231 MRPS8YMR158W 468 nt-0.77□□□□□ -2.53
TY1B-DR3Q99231 snR36snR36 182 nt-0.77□□□□□ -2.53
TY1B-DR3Q99231 YJL135WYJL135W 318 nt-0.78□□□□□ -2.53
TY1B-DR3Q99231 15S_rRNA15S_rRNA 1649 nt-0.78□□□□□ -2.53
TY1B-DR3Q99231 ATC1YDR184C 885 nt-0.79□□□□□ -2.54
TY1B-DR3Q99231 YFR012W-AYFR012W-A 87 nt-0.8□□□□□ -2.54
TY1B-DR3Q99231 ECL1YGR146C 636 nt-0.8□□□□□ -2.54
TY1B-DR3Q99231 YBR121C-AYBR121C-A 159 nt-0.8□□□□□ -2.54
TY1B-DR3Q99231 PAA1YDR071C 576 nt-0.8□□□□□ -2.54
TY1B-DR3Q99231 YGR115CYGR115C 780 nt-0.81□□□□□ -2.54
TY1B-DR3Q99231 YHR138CYHR138C 345 nt-0.81□□□□□ -2.54
TY1B-DR3Q99231 YLL006W-AYLL006W-A 177 nt-0.81□□□□□ -2.54
TY1B-DR3Q99231 YMR075C-AYMR075C-A 366 nt-0.81□□□□□ -2.54
TY1B-DR3Q99231 PBI2YNL015W 228 nt-0.81□□□□□ -2.54
TY1B-DR3Q99231 snR59snR59 78 nt-0.82□□□□□ -2.54
TY1B-DR3Q99231 BLS1YLR408C 369 nt-0.82□□□□□ -2.54
TY1B-DR3Q99231 YBL008W-AYBL008W-A 240 nt-0.82□□□□□ -2.54
TY1B-DR3Q99231 YAP6YDR259C 1152 nt-0.83□□□□□ -2.54
TY1B-DR3Q99231 YNL319WYNL319W 441 nt-0.83□□□□□ -2.54
TY1B-DR3Q99231 tT(UGU)Q1tT(UGU)Q1 76 nt-0.83□□□□□ -2.54
TY1B-DR3Q99231 SDS22YKL193C 1017 nt-0.83□□□□□ -2.54
TY1B-DR3Q99231 LIN1YHR156C 1023 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 YIL071W-AYIL071W-A 477 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 IPP1YBR011C 864 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 YOR248WYOR248W 303 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 YPR096CYPR096C 303 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
TY1B-DR3Q99231 tA(UGC)QtA(UGC)Q 76 nt-0.85□□□□□ -2.55
TY1B-DR3Q99231 YOL106WYOL106W 354 nt-0.85□□□□□ -2.55
TY1B-DR3Q99231 DCP1YOL149W 696 nt-0.86□□□□□ -2.55
TY1B-DR3Q99231 YPL119C-AYPL119C-A 264 nt-0.86□□□□□ -2.55
TY1B-DR3Q99231 SNU56YDR240C 1479 nt-0.87□□□□□ -2.55
TY1B-DR3Q99231 RPS25BYLR333C 327 nt-0.88□□□□□ -2.55
TY1B-DR3Q99231 YOR020W-AYOR020W-A 273 nt-0.88□□□□□ -2.55
TY1B-DR3Q99231 YER076W-AYER076W-A 348 nt-0.89□□□□□ -2.55
TY1B-DR3Q99231 YHL046W-AYHL046W-A 327 nt-0.89□□□□□ -2.55
TY1B-DR3Q99231 PSF2YJL072C 642 nt-0.89□□□□□ -2.55
TY1B-DR3Q99231 YOR345CYOR345C 351 nt-0.89□□□□□ -2.55
TY1B-DR3Q99231 POP6YGR030C 477 nt-0.9□□□□□ -2.55
TY1B-DR3Q99231 YER188C-AYER188C-A 300 nt-0.91□□□□□ -2.55
TY1B-DR3Q99231 YLR287CYLR287C 1068 nt-0.91□□□□□ -2.55
TY1B-DR3Q99231 QCR7YDR529C 384 nt-0.91□□□□□ -2.56
TY1B-DR3Q99231 YHR131W-AYHR131W-A 246 nt-0.91□□□□□ -2.56
TY1B-DR3Q99231 COX7YMR256C 183 nt-0.92□□□□□ -2.56
TY1B-DR3Q99231 YHR054CYHR054C 1065 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 snR57snR57 88 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 YCR024C-BYCR024C-B 267 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 GPX1YKL026C 504 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 YLR171WYLR171W 390 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 snR161snR161 161 nt-0.93□□□□□ -2.56
TY1B-DR3Q99231 SPO21YOL091W 1830 nt-0.94□□□□□ -2.56
TY1B-DR3Q99231 YDR269CYDR269C 324 nt-0.95□□□□□ -2.56
TY1B-DR3Q99231 YMR307C-AYMR307C-A 195 nt-0.95□□□□□ -2.56
TY1B-DR3Q99231 YGL258W-AYGL258W-A 234 nt-0.96□□□□□ -2.56
TY1B-DR3Q99231 PCF11YDR228C 1881 nt-0.97□□□□□ -2.56
TY1B-DR3Q99231 YLR198CYLR198C 360 nt-0.97□□□□□ -2.56
TY1B-DR3Q99231 YBR099CYBR099C 384 nt-0.97□□□□□ -2.56
TY1B-DR3Q99231 LRP1YHR081W 555 nt-0.98□□□□□ -2.57
TY1B-DR3Q99231 YER138W-AYER138W-A 105 nt-0.98□□□□□ -2.57
TY1B-DR3Q99231 YHL041WYHL041W 450 nt-0.98□□□□□ -2.57
TY1B-DR3Q99231 YMR304C-AYMR304C-A 351 nt-0.98□□□□□ -2.57
TY1B-DR3Q99231 YER079WYER079W 633 nt-0.99□□□□□ -2.57
TY1B-DR3Q99231 PAU9YBL108C-A 129 nt-0.99□□□□□ -2.57
TY1B-DR3Q99231 YPL261CYPL261C 309 nt-0.99□□□□□ -2.57
TY1B-DR3Q99231 tN(GUU)QtN(GUU)Q 71 nt-1□□□□□ -2.57
TY1B-DR3Q99231 CMC1YKL137W 336 nt-1□□□□□ -2.57
TY1B-DR3Q99231 YOL029CYOL029C 606 nt-1□□□□□ -2.57
TY1B-DR3Q99231 YGL123C-AYGL123C-A 231 nt-1.01□□□□□ -2.57
TY1B-DR3Q99231 CWC23YGL128C 852 nt-1.01□□□□□ -2.57
TY1B-DR3Q99231 RPF1YHR088W 888 nt-1.01□□□□□ -2.57
TY1B-DR3Q99231 YIR044CYIR044C 186 nt-1.01□□□□□ -2.57
TY1B-DR3Q99231 IRC16YPR038W 360 nt-1.01□□□□□ -2.57
TY1B-DR3Q99231 YKL111CYKL111C 336 nt-1.02□□□□□ -2.57
TY1B-DR3Q99231 YML007C-AYML007C-A 111 nt-1.02□□□□□ -2.57
TY1B-DR3Q99231 YKL068W-AYKL068W-A 237 nt-1.03□□□□□ -2.57
TY1B-DR3Q99231 YOR011W-AYOR011W-A 207 nt-1.03□□□□□ -2.57
TY1B-DR3Q99231 YKL202WYKL202W 582 nt-1.03□□□□□ -2.58
TY1B-DR3Q99231 TAR1YLR154W-C 375 nt-1.03□□□□□ -2.58
TY1B-DR3Q99231 YML108WYML108W 318 nt-1.03□□□□□ -2.58
TY1B-DR3Q99231 YDL185C-AYDL185C-A 228 nt-1.04□□□□□ -2.58
TY1B-DR3Q99231 ACF4YJR083C 930 nt-1.04□□□□□ -2.58
TY1B-DR3Q99231 EST1YLR233C 2100 nt-1.04□□□□□ -2.58
TY1B-DR3Q99231 YIL002W-AYIL002W-A 210 nt-1.05□□□□□ -2.58
TY1B-DR3Q99231 YCR018C-AYCR018C-A 255 nt-1.06□□□□□ -2.58
TY1B-DR3Q99231 YIL066W-AYIL066W-A 444 nt-1.06□□□□□ -2.58
TY1B-DR3Q99231 RPS20YHL015W 366 nt-1.06□□□□□ -2.58
TY1B-DR3Q99231 YJL020W-AYJL020W-A 258 nt-1.06□□□□□ -2.58
TY1B-DR3Q99231 VAM3YOR106W 852 nt-1.06□□□□□ -2.58
TY1B-DR3Q99231 POL32YJR043C 1053 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 ILM1YJR118C 612 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 YMR158W-BYMR158W-B 321 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 YDL007C-AYDL007C-A 258 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 YHR050W-AYHR050W-A 171 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 YML100W-AYML100W-A 174 nt-1.08□□□□□ -2.58
TY1B-DR3Q99231 RRI2YOL117W 1938 nt-1.09□□□□□ -2.58
TY1B-DR3Q99231 SNU13YEL026W 381 nt-1.09□□□□□ -2.58
TY1B-DR3Q99231 BER1YLR412W 825 nt-1.09□□□□□ -2.58
Retrieved 100 of 7,029 protein–RNA pairs in 45.4 ms