Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 RPS2P52-201ENST00000469610 820 ntBASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 PRKY-204ENST00000533551 1019 ntBASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 MTDHP1-201ENST00000605323 784 ntBASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 AL121829.2-201ENST00000620908 328 ntBASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 AP006294.2-201ENST00000641667 209 ntBASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 C1QBPP2-201ENST00000528754 825 ntBASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 AL121906.2-201ENST00000621597 723 ntBASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP1Q96SZ6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 AL158047.1-201ENST00000445918 881 ntBASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 RPPH1-201ENST00000516869 333 ntBASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 AC233263.1-201ENST00000578059 224 ntBASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 FAM197Y4-202ENST00000622692 608 ntBASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 KRT16P6-202ENST00000425692 1426 ntBASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP1Q96SZ6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 UBE2SP1-201ENST00000450587 669 ntBASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 AL359736.2-201ENST00000621992 437 ntBASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP1Q96SZ6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP1Q96SZ6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
CDK5RAP1Q96SZ6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP1Q96SZ6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP1Q96SZ6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP1Q96SZ6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms