Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 AC006058.3-201ENST00000606217 1069 ntBASIC23.81■■□□□ 1.4
DDX11Q96FC9 AC100791.3-201ENST00000617619 330 ntBASIC23.81■■□□□ 1.4
DDX11Q96FC9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX11Q96FC9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX11Q96FC9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX11Q96FC9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX11Q96FC9 AC092720.2-201ENST00000602388 1665 ntBASIC23.79■■□□□ 1.4
DDX11Q96FC9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 CYP2T3P-201ENST00000601990 817 ntBASIC23.79■■□□□ 1.4
DDX11Q96FC9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX11Q96FC9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX11Q96FC9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 RPS2P52-201ENST00000469610 820 ntBASIC23.78■■□□□ 1.4
DDX11Q96FC9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX11Q96FC9 AL162377.1-201ENST00000618844 1793 ntBASIC23.78■■□□□ 1.4
DDX11Q96FC9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX11Q96FC9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 UNC93B5-201ENST00000530315 699 ntBASIC23.77■■□□□ 1.4
DDX11Q96FC9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX11Q96FC9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
DDX11Q96FC9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
DDX11Q96FC9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 AC128676.1-201ENST00000454392 318 ntBASIC23.76■■□□□ 1.39
DDX11Q96FC9 AC098590.1-201ENST00000468126 897 ntBASIC23.76■■□□□ 1.39
DDX11Q96FC9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.76■■□□□ 1.39
DDX11Q96FC9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX11Q96FC9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms