Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 HLA-G-202ENST00000376815 851 ntBASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 PNN-202ENST00000553331 656 ntTSL 3 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AL121829.2-201ENST00000620908 328 ntBASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 LINC01311-201ENST00000565162 1445 ntBASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SYNE2Q8WXH0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC073648.2-201ENST00000510116 352 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC083849.1-201ENST00000615227 514 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AP006288.1-201ENST00000446065 395 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC112907.2-201ENST00000448639 330 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MEIS3P1-201ENST00000495167 958 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC104109.2-201ENST00000602919 1418 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC008175.2-201ENST00000612840 297 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC141257.4-201ENST00000634557 245 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 AC136944.6-201ENST00000634818 245 ntBASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC8.23□□□□□ -1.09
SYNE2Q8WXH0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AKR1C7P-201ENST00000305623 895 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC005034.1-201ENST00000426657 489 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 CCR12P-201ENST00000446203 998 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC092338.2-201ENST00000568827 1415 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC097488.1-201ENST00000507834 756 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 AC011467.4-201ENST00000594891 528 ntBASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC8.22□□□□□ -1.09
SYNE2Q8WXH0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms