Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 BX276092.2-201ENST00000417668 665 ntBASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 TSPY6P-201ENST00000448518 926 ntBASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 AC105020.6-201ENST00000621523 1217 ntBASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 AL020996.1-203ENST00000536896 2307 ntBASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIMC1Q8NDZ2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SIMC1Q8NDZ2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SIMC1Q8NDZ2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SIMC1Q8NDZ2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.89■□□□□ 0.62
SIMC1Q8NDZ2 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 MIPEPP3-201ENST00000412105 444 ntBASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.89■□□□□ 0.61
SIMC1Q8NDZ2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 GPX1P1-201ENST00000388829 606 ntBASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 AC098934.4-201ENST00000564127 592 ntBASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIMC1Q8NDZ2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 AL138781.1-201ENST00000566567 1274 ntBASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIMC1Q8NDZ2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 AC099778.1-201ENST00000568593 1911 ntBASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 PGM5P4-201ENST00000421970 445 ntBASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 AC104771.1-201ENST00000603335 964 ntBASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms