Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 KSR1P1-201ENST00000446298 240 ntBASIC15.71■□□□□ 0.11
C3orf56Q8N813 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 KRT18P56-201ENST00000507275 550 ntBASIC15.71■□□□□ 0.11
C3orf56Q8N813 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 AL358472.4-201ENST00000633140 710 ntBASIC15.71■□□□□ 0.11
C3orf56Q8N813 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C3orf56Q8N813 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C3orf56Q8N813 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
C3orf56Q8N813 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
C3orf56Q8N813 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
C3orf56Q8N813 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
C3orf56Q8N813 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
C3orf56Q8N813 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.71■□□□□ 0.1
C3orf56Q8N813 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC079834.2-201ENST00000609776 1949 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 KRT16P1-201ENST00000399124 1418 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 AK4P3-201ENST00000418260 669 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC116562.2-201ENST00000507042 360 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC010203.1-204ENST00000548782 407 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 KRT126P-201ENST00000549467 1181 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 AC026471.6-201ENST00000622954 1905 ntBASIC15.7■□□□□ 0.1
C3orf56Q8N813 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.7■□□□□ 0.1
C3orf56Q8N813 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C3orf56Q8N813 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
C3orf56Q8N813 AC027702.1-201ENST00000563810 1770 ntBASIC15.69■□□□□ 0.1
C3orf56Q8N813 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C3orf56Q8N813 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C3orf56Q8N813 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C3orf56Q8N813 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C3orf56Q8N813 AC128688.1-201ENST00000487626 519 ntBASIC15.68■□□□□ 0.1
C3orf56Q8N813 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 AL121894.2-201ENST00000602977 491 ntBASIC15.68■□□□□ 0.1
C3orf56Q8N813 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.68■□□□□ 0.1
C3orf56Q8N813 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C3orf56Q8N813 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C3orf56Q8N813 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms