Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 AL158047.1-201ENST00000445918 881 ntBASIC31.51■■■□□ 2.64
VPS8Q8N3P4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
VPS8Q8N3P4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VPS8Q8N3P4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VPS8Q8N3P4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VPS8Q8N3P4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
VPS8Q8N3P4 AL162377.1-201ENST00000618844 1793 ntBASIC31.51■■■□□ 2.63
VPS8Q8N3P4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
VPS8Q8N3P4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 AC239809.2-201ENST00000415381 517 ntBASIC31.5■■■□□ 2.63
VPS8Q8N3P4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
VPS8Q8N3P4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 DET1-205ENST00000558413 583 ntTSL 4 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 AL512408.1-201ENST00000569378 2000 ntBASIC31.49■■■□□ 2.63
VPS8Q8N3P4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.49■■■□□ 2.63
VPS8Q8N3P4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
VPS8Q8N3P4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
VPS8Q8N3P4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
VPS8Q8N3P4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
VPS8Q8N3P4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.48■■■□□ 2.63
VPS8Q8N3P4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 AL023875.1-201ENST00000640777 796 ntBASIC31.47■■■□□ 2.63
VPS8Q8N3P4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.47■■■□□ 2.63
VPS8Q8N3P4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
VPS8Q8N3P4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 AC093827.2-201ENST00000512654 315 ntBASIC31.45■■■□□ 2.63
VPS8Q8N3P4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
VPS8Q8N3P4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC31.45■■■□□ 2.62
VPS8Q8N3P4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
VPS8Q8N3P4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
VPS8Q8N3P4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms