Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP006294.2-201ENST00000641667 209 ntBASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SCN4BQ8IWT1 DPP3P2-201ENST00000416030 1696 ntBASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN4BQ8IWT1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 HLA-G-202ENST00000376815 851 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 HLA-G-203ENST00000376818 1127 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 MTDHP1-201ENST00000605323 784 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AL023875.1-201ENST00000640777 796 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 PTBP1P-201ENST00000554374 1601 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AC092720.2-201ENST00000602388 1665 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 AC124283.5-201ENST00000624661 1809 ntBASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN4BQ8IWT1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SCN4BQ8IWT1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 UBE2SP1-201ENST00000450587 669 ntBASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms