Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00346Q8IVM7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00346Q8IVM7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 AL691432.2-201ENST00000607222 2038 ntBASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 CYP2T1P-201ENST00000432607 1285 ntBASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00346Q8IVM7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 MCRIP2P1-201ENST00000394346 511 ntBASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 AC022517.1-201ENST00000592429 346 ntBASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00346Q8IVM7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms