Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CROCCP3Q8IVE0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 TSPY13P-201ENST00000338964 914 ntBASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 ABHD17AP5-201ENST00000580133 923 ntBASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CROCCP3Q8IVE0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 FP700111.2-201ENST00000619190 1892 ntBASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 AC103834.1-201ENST00000520383 144 ntBASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 MTDHP2-201ENST00000601468 714 ntBASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 AC092028.1-203ENST00000608262 953 ntBASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CROCCP3Q8IVE0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 OR2I1P-207ENST00000453522 948 ntBASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 AL031848.2-201ENST00000607670 837 ntBASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CROCCP3Q8IVE0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.14■□□□□ 0.5
CROCCP3Q8IVE0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.14■□□□□ 0.5
CROCCP3Q8IVE0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CROCCP3Q8IVE0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CROCCP3Q8IVE0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms