Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 DUSP5P1-201ENST00000441325 1139 ntBASIC25.39■■□□□ 1.66
COL23A1Q86Y22 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.39■■□□□ 1.66
COL23A1Q86Y22 AC139887.4-201ENST00000607877 719 ntBASIC25.39■■□□□ 1.66
COL23A1Q86Y22 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.39■■□□□ 1.65
COL23A1Q86Y22 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
COL23A1Q86Y22 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 AC026396.1-201ENST00000419388 421 ntBASIC25.38■■□□□ 1.65
COL23A1Q86Y22 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 AC128688.1-201ENST00000487626 519 ntBASIC25.38■■□□□ 1.65
COL23A1Q86Y22 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 AP000550.4-202ENST00000639755 178 ntBASIC25.38■■□□□ 1.65
COL23A1Q86Y22 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL23A1Q86Y22 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL23A1Q86Y22 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AC097488.1-201ENST00000507834 756 ntBASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AC026271.3-201ENST00000571884 352 ntBASIC25.36■■□□□ 1.65
COL23A1Q86Y22 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 DGCR10-201ENST00000609839 495 ntBASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AL138966.2-201ENST00000621997 464 ntBASIC25.36■■□□□ 1.65
COL23A1Q86Y22 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL23A1Q86Y22 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 AC011484.1-201ENST00000377652 1995 ntBASIC25.35■■□□□ 1.65
COL23A1Q86Y22 RNF152P1-201ENST00000397754 604 ntBASIC25.35■■□□□ 1.65
COL23A1Q86Y22 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 AL445675.2-201ENST00000620291 557 ntBASIC25.35■■□□□ 1.65
COL23A1Q86Y22 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
COL23A1Q86Y22 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
COL23A1Q86Y22 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.33■■□□□ 1.65
COL23A1Q86Y22 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.33■■□□□ 1.64
COL23A1Q86Y22 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL23A1Q86Y22 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms