Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RAPH1Q70E73 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RAPH1Q70E73 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPH1Q70E73 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPH1Q70E73 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAPH1Q70E73 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAPH1Q70E73 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.1■□□□□ 0.81
RAPH1Q70E73 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAPH1Q70E73 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.09■□□□□ 0.81
RAPH1Q70E73 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.09■□□□□ 0.81
RAPH1Q70E73 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAPH1Q70E73 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAPH1Q70E73 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAPH1Q70E73 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAPH1Q70E73 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAPH1Q70E73 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 MYCNOS-205ENST00000641950 531 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms