Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 MIR2861-201ENST00000636310 90 ntBASIC12.71□□□□□ -0.37
LINC00575Q6W349 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LINC00575Q6W349 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 SYT6-210ENST00000641643 1587 ntBASIC12.71□□□□□ -0.37
LINC00575Q6W349 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00575Q6W349 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LINC00575Q6W349 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00575Q6W349 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00575Q6W349 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00575Q6W349 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00575Q6W349 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC00575Q6W349 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00575Q6W349 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00575Q6W349 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 AL033527.3-201ENST00000566366 1196 ntBASIC12.69□□□□□ -0.38
LINC00575Q6W349 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00575Q6W349 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00575Q6W349 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 LINC01465-201ENST00000408887 1940 ntBASIC12.68□□□□□ -0.38
LINC00575Q6W349 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.68□□□□□ -0.38
LINC00575Q6W349 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms