Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 CYP2T1P-201ENST00000432607 1285 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AC026185.1-201ENST00000445748 174 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AL162412.1-201ENST00000567129 965 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AC005181.1-201ENST00000604782 1256 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AC016405.3-201ENST00000607710 860 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 FAM21FP-204ENST00000608637 956 ntBASIC18.25■□□□□ 0.51
NIPAL3Q6P499 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NIPAL3Q6P499 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.24■□□□□ 0.51
NIPAL3Q6P499 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 AC069236.1-201ENST00000604339 616 ntBASIC18.24■□□□□ 0.51
NIPAL3Q6P499 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 AC008694.1-202ENST00000636953 945 ntBASIC18.24■□□□□ 0.51
NIPAL3Q6P499 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NIPAL3Q6P499 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NIPAL3Q6P499 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPAL3Q6P499 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPAL3Q6P499 MIR663A-201ENST00000385250 93 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms