Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SLC25A1P1-201ENST00000528351 927 ntBASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 AC055717.3-201ENST00000622967 595 ntBASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL13A1Q5TAT6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 IL9RP2-201ENST00000423948 1312 ntBASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 TSPY12P-201ENST00000421279 868 ntBASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL13A1Q5TAT6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 SLC25A1P2-201ENST00000430693 912 ntBASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 AC091304.2-201ENST00000564639 760 ntBASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL13A1Q5TAT6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.83■■□□□ 1.24
COL13A1Q5TAT6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL13A1Q5TAT6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 TSSC2-201ENST00000450217 709 ntBASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 AC092338.2-201ENST00000568827 1415 ntBASIC22.82■■□□□ 1.24
COL13A1Q5TAT6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 PMS2P7-201ENST00000506558 1336 ntBASIC22.81■■□□□ 1.24
COL13A1Q5TAT6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL13A1Q5TAT6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 SPDYE13P-201ENST00000445314 798 ntBASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 AL512604.3-201ENST00000569583 964 ntBASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 C11orf96-202ENST00000528572 1834 ntBASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL13A1Q5TAT6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
COL13A1Q5TAT6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms