Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 RFPL4AP1-201ENST00000530883 850 ntBASIC11.1□□□□□ -0.63
UBR4Q5T4S7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 AC012645.4-201ENST00000610691 1061 ntBASIC11.1□□□□□ -0.63
UBR4Q5T4S7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 SPDYE15P-201ENST00000424157 909 ntBASIC11.1□□□□□ -0.63
UBR4Q5T4S7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBR4Q5T4S7 AL441883.1-201ENST00000566170 1045 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AL136038.4-201ENST00000603606 1261 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AL121829.2-201ENST00000620908 328 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 DUX4L17-201ENST00000557360 1267 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 KRT18P31-201ENST00000506277 1292 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 RPSAP43-201ENST00000402237 625 ntBASIC11.09□□□□□ -0.63
UBR4Q5T4S7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBR4Q5T4S7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 KRT18P58-201ENST00000527480 1120 ntBASIC11.08□□□□□ -0.63
UBR4Q5T4S7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.08□□□□□ -0.63
UBR4Q5T4S7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC11.08□□□□□ -0.64
UBR4Q5T4S7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBR4Q5T4S7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC11.07□□□□□ -0.64
UBR4Q5T4S7 AC092329.2-201ENST00000598402 547 ntBASIC11.07□□□□□ -0.64
UBR4Q5T4S7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC11.07□□□□□ -0.64
UBR4Q5T4S7 AC007663.1-201ENST00000438948 1240 ntBASIC11.07□□□□□ -0.64
UBR4Q5T4S7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.07□□□□□ -0.64
UBR4Q5T4S7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
UBR4Q5T4S7 TPSP2-201ENST00000561760 610 ntBASIC11.07□□□□□ -0.64
UBR4Q5T4S7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms