Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RUNDC3AQ59EK9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 AL020996.1-203ENST00000536896 2307 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 AC097381.1-201ENST00000429019 1296 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 YBX1P1-201ENST00000445822 960 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 KRT18P14-201ENST00000534205 1250 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 AL356652.1-201ENST00000615962 565 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 AC093484.2-201ENST00000580996 2166 ntBASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RUNDC3AQ59EK9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RUNDC3AQ59EK9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 AC087633.2-202ENST00000565166 1439 ntBASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 PGM5P4-201ENST00000421970 445 ntBASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.91■□□□□ 0.62
RUNDC3AQ59EK9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RUNDC3AQ59EK9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
RUNDC3AQ59EK9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms