Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 MCRIP2P1-201ENST00000394346 511 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 AC006015.1-201ENST00000429970 570 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 RARRES2P4-201ENST00000514074 484 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 AC100791.3-201ENST00000617619 330 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 AC231657.2-201ENST00000624556 255 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 AL391422.3-201ENST00000603791 2761 ntBASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VMA21Q3ZAQ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
VMA21Q3ZAQ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
VMA21Q3ZAQ7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VMA21Q3ZAQ7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VMA21Q3ZAQ7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 AL162430.1-201ENST00000480705 870 ntBASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 DUX4L16-201ENST00000555130 1264 ntBASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VMA21Q3ZAQ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 AC007322.1-201ENST00000426983 750 ntBASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 AC068338.2-201ENST00000563278 1430 ntBASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VMA21Q3ZAQ7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 CNN2P6-201ENST00000439038 900 ntBASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VMA21Q3ZAQ7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms