Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 AC116562.4-201ENST00000641316 2276 ntBASIC17.72■□□□□ 0.43
ODF4Q2M2E3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.72■□□□□ 0.43
ODF4Q2M2E3 AC125437.2-201ENST00000625180 2167 ntBASIC17.72■□□□□ 0.43
ODF4Q2M2E3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 AC007322.3-201ENST00000426526 701 ntBASIC17.71■□□□□ 0.43
ODF4Q2M2E3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 CCDC92B-201ENST00000575506 885 ntBASIC17.71■□□□□ 0.43
ODF4Q2M2E3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ODF4Q2M2E3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ODF4Q2M2E3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ODF4Q2M2E3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 MIR638-201ENST00000385237 100 ntBASIC17.7■□□□□ 0.42
ODF4Q2M2E3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 AC091799.1-201ENST00000422823 811 ntBASIC17.7■□□□□ 0.42
ODF4Q2M2E3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 KRT18P14-201ENST00000534205 1250 ntBASIC17.7■□□□□ 0.42
ODF4Q2M2E3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ODF4Q2M2E3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 AC123595.1-201ENST00000440769 1046 ntBASIC17.69■□□□□ 0.42
ODF4Q2M2E3 YBX1P1-201ENST00000445822 960 ntBASIC17.69■□□□□ 0.42
ODF4Q2M2E3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 RBM17P2-201ENST00000616397 1405 ntBASIC17.69■□□□□ 0.42
ODF4Q2M2E3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 AL691432.2-201ENST00000607222 2038 ntBASIC17.69■□□□□ 0.42
ODF4Q2M2E3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ODF4Q2M2E3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms