Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HCFC1P51610 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HCFC1P51610 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCFC1P51610 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCFC1P51610 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCFC1P51610 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCFC1P51610 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HCFC1P51610 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HCFC1P51610 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HCFC1P51610 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.58■□□□□ 0.4
HCFC1P51610 AL355355.2-201ENST00000442321 338 ntBASIC17.58■□□□□ 0.4
HCFC1P51610 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.58■□□□□ 0.4
HCFC1P51610 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.58■□□□□ 0.4
HCFC1P51610 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.58■□□□□ 0.4
HCFC1P51610 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCFC1P51610 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HCFC1P51610 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCFC1P51610 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 AC113347.1-201ENST00000413321 391 ntBASIC17.57■□□□□ 0.4
HCFC1P51610 FAM197Y1-201ENST00000421178 764 ntBASIC17.57■□□□□ 0.4
HCFC1P51610 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.57■□□□□ 0.4
HCFC1P51610 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.57■□□□□ 0.4
HCFC1P51610 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
HCFC1P51610 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HCFC1P51610 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.57■□□□□ 0.4
HCFC1P51610 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.57■□□□□ 0.4
HCFC1P51610 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HCFC1P51610 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 HTR7P1-201ENST00000538670 1336 ntBASIC17.57■□□□□ 0.4
HCFC1P51610 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HCFC1P51610 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HCFC1P51610 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 AC116562.2-201ENST00000507042 360 ntBASIC17.57■□□□□ 0.4
HCFC1P51610 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.57■□□□□ 0.4
HCFC1P51610 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCFC1P51610 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HCFC1P51610 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 PTBP1P-201ENST00000554374 1601 ntBASIC17.56■□□□□ 0.4
HCFC1P51610 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.56■□□□□ 0.4
HCFC1P51610 MMP23A-201ENST00000234610 1017 ntBASIC17.56■□□□□ 0.4
HCFC1P51610 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.56■□□□□ 0.4
HCFC1P51610 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC1P51610 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
HCFC1P51610 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.56■□□□□ 0.4
HCFC1P51610 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC1P51610 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 AC023632.3-201ENST00000521633 145 ntBASIC17.56■□□□□ 0.4
HCFC1P51610 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HCFC1P51610 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.56■□□□□ 0.4
HCFC1P51610 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC1P51610 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC1P51610 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
HCFC1P51610 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.56■□□□□ 0.4
HCFC1P51610 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.56■□□□□ 0.4
HCFC1P51610 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HCFC1P51610 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 RBM17P1-201ENST00000453646 1190 ntBASIC17.55■□□□□ 0.4
HCFC1P51610 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
HCFC1P51610 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HCFC1P51610 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC1P51610 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC1P51610 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HCFC1P51610 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC1P51610 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
HCFC1P51610 KRT8P36-201ENST00000489121 1440 ntBASIC17.55■□□□□ 0.4
HCFC1P51610 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HCFC1P51610 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 AC145285.6-201ENST00000604632 637 ntBASIC17.55■□□□□ 0.4
HCFC1P51610 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HCFC1P51610 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC1P51610 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC1P51610 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms