Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6CP51160 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
PDE6CP51160 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6CP51160 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6CP51160 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.66■■□□□ 1.06
PDE6CP51160 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6CP51160 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE6CP51160 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDE6CP51160 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6CP51160 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE6CP51160 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6CP51160 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6CP51160 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.65■■□□□ 1.06
PDE6CP51160 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDE6CP51160 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE6CP51160 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.65■■□□□ 1.06
PDE6CP51160 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.65■■□□□ 1.06
PDE6CP51160 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.65■■□□□ 1.06
PDE6CP51160 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.65■■□□□ 1.06
PDE6CP51160 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.65■■□□□ 1.06
PDE6CP51160 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE6CP51160 TMEM191A-211ENST00000637163 1067 ntBASIC21.65■■□□□ 1.06
PDE6CP51160 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDE6CP51160 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6CP51160 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6CP51160 AC099778.1-201ENST00000568593 1911 ntBASIC21.65■■□□□ 1.06
PDE6CP51160 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDE6CP51160 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDE6CP51160 DPP3P2-201ENST00000416030 1696 ntBASIC21.64■■□□□ 1.05
PDE6CP51160 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 LSM12P1-201ENST00000411836 588 ntBASIC21.64■■□□□ 1.05
PDE6CP51160 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
PDE6CP51160 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDE6CP51160 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6CP51160 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE6CP51160 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDE6CP51160 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.64■■□□□ 1.05
PDE6CP51160 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE6CP51160 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE6CP51160 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDE6CP51160 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 FAM201B-201ENST00000458407 597 ntBASIC21.63■■□□□ 1.05
PDE6CP51160 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6CP51160 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PDE6CP51160 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE6CP51160 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6CP51160 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE6CP51160 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6CP51160 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6CP51160 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.62■■□□□ 1.05
PDE6CP51160 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 MCRIP2P1-201ENST00000394346 511 ntBASIC21.62■■□□□ 1.05
PDE6CP51160 TSPY20P-201ENST00000450910 630 ntBASIC21.62■■□□□ 1.05
PDE6CP51160 AC091874.3-201ENST00000512672 1195 ntBASIC21.62■■□□□ 1.05
PDE6CP51160 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.62■■□□□ 1.05
PDE6CP51160 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
PDE6CP51160 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.62■■□□□ 1.05
PDE6CP51160 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PDE6CP51160 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDE6CP51160 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.62■■□□□ 1.05
PDE6CP51160 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.61■■□□□ 1.05
PDE6CP51160 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDE6CP51160 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 MYC-209ENST00000641252 345 ntBASIC21.61■■□□□ 1.05
PDE6CP51160 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDE6CP51160 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms